Browse by Subject STRUCTURAL BASIS

Showing results 1 to 57 of 57

1
A Novel N-terminal Region to Chromodomain in CHD7 is Required for the Efficient Remodeling Activity

Lee, Eunhye; Kang, Chanshin; Purhonen, Pasi; Hebert, Hans; Bouazoune, Karim; Hohng, Sungchul; Song, Ji-Joon, JOURNAL OF MOLECULAR BIOLOGY, v.433, no.18, 2021-09

2
A Phosphate-Binding Pocket within the Platform-PAZ-Connector Helix Cassette of Human Dicer

Tian, Yuan; Simanshu, Dhirendra K.; Ma, Jin-Biao; Park, Jong-Eun; Heo, Inha; Kim, V. Narry; Patel, Dinshaw J., MOLECULAR CELL, v.53, no.4, pp.606 - 616, 2014-02

3
A proton transfer network that generates deprotonated tyrosine is a key to producing reactive oxygen species in phototoxic KillerRed protein

Lee, Wook; Kim, Inkoo; Rhee, Young Min, PHYSICAL CHEMISTRY CHEMICAL PHYSICS, v.20, no.34, pp.22342 - 22350, 2018-09

4
Allosteric regulation of chromatin-modifying enzymes

Kim, Jung-Ae; Kwon, Minjung; Kim, Jaehoon, BIOCHEMISTRY, v.58, no.1, pp.15 - 23, 2019-01

5
An ensemble of interconverting conformations of the elemental paused transcription complex creates regulatory options

Kang, Jin Young; V. Mishanina, Tatiana; Bao, Yu; Chen, James; Llewellyn, Eliza; Liu, James; Darst, Seth A.; et al, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, v.120, no.8, 2023-02

6
Argonaute and RNA - getting into the groove

Song, Ji-Joon; Joshua-Tor, Leemor, CURRENT OPINION IN STRUCTURAL BIOLOGY, v.16, no.1, pp.5 - 11, 2006-02

7
Comprehensive identification of PIP3-regulated PH domains from C elegans to H sapiens by model prediction and live imaging

Park, Wei Sun; Heo, Won Do; Whalen, James H.; O'Rourke, Nancy A.; Bryan, Heather M.; Meyer, Tobias; Teruel, Mary N., MOLECULAR CELL, v.30, no.3, pp.381 - 392, 2008-05

8
Connecting two proteins using a fusion alpha helix stabilized by a chemical cross linker

Jeong, Woo Hyeon; Lee, Haerim; Song, Dong Hyun; Eom, Jae-Hoon; Kim, Sun Chang; Lee, Hee Seung; Lee, Hayyoung; et al, NATURE COMMUNICATIONS, v.7, 2016-05

9
Covalent binding of uracil DNA glycosylase UdgX to abasic DNA upon uracil excision

Ahn, Woo-Chan; Aroli, Shashanka; Kim, Jin-Hahn; Moon, Jeong Hee; Lee, Ga Seal; Lee, Min-Ho; Sang, Pau Biak; et al, NATURE CHEMICAL BIOLOGY, v.15, no.6, pp.607 - +, 2019-06

10
CRISPR/Cas-based genome engineering in natural product discovery

Tong, Yaojun; Weber, Tilmann; Lee, Sang Yup, NATURAL PRODUCT REPORTS, v.36, no.9, pp.1262 - 1280, 2019-09

11
Current Understanding of Hypoxia in Glioblastoma Multiforme and Its Response to Immunotherapy

Park, Jang Hyun; Lee, Heung Kyu, CANCERS, v.14, no.5, 2022-03

12
Deciphering Teneurin Domains That Facilitate Cellular Recognition, Cell-Cell Adhesion, and Neurite Outgrowth Using Atomic Force Microscopy-Based Single-Cell Force Spectroscopy

Beckmann, Jan; Schubert, Rajib; Chiquet-Ehrismann, Ruth; Mueller, Daniel J., NANO LETTERS, v.13, no.6, pp.2937 - 2946, 2013-06

13
Discovery of beta-Arrestin Biased Ligands of 5-HT7R

Kim, Youngjae; Kim, Hyunguk; Lee, Jieon; Lee, Jae Kyun; Min, Sun-Joon; Seong, Jihye; Rhim, Hyewhon; et al, JOURNAL OF MEDICINAL CHEMISTRY, v.61, no.16, pp.7218 - 7233, 2018-08

14
Effect of XIAP overexpression on sodium butyrate-induced apoptosis in recombinant Chinese hamster ovary cells producing erythropoietin

Kim, Yeon-Gu; Kim, Jee Yon; Lee, Gyun-Min, JOURNAL OF BIOTECHNOLOGY, v.144, no.4, pp.299 - 303, 2009-12

15
Emission shaping in fluorescent proteins: role of electrostatics and pi-stacking

Park, Jae Woo; Rhee, Young Min, PHYSICAL CHEMISTRY CHEMICAL PHYSICS, v.18, no.5, pp.3944 - 3955, 2016-02

16
Experimental phasing using zinc anomalous scattering

Cha, Sun-Shin; An, Young Jun; Jeong, Chang-Sook; Kim, Min-Kyu; Lee, Sung-Gyu; Lee, Kwang-Hoon; Oh, Byung-Ha, ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, v.68, pp.1253 - 1258, 2012-09

17
Genetic incorporation of L-dihydroxyphenylalanine (DOPA) biosynthesized by a tyrosine phenol-lyase

Kim, Sanggil; Sung, Bong Hyun; Kim, Sun Chang; Lee, Hyun Soo, CHEMICAL COMMUNICATIONS, v.54, no.24, pp.3002 - 3005, 2018-03

18
Immunoglobulin Fc-fused, neuropilin-1-specific peptide shows efficient tumor tissue penetration and inhibits tumor growth via anti-angiogenesis

Kim, Ye-Jin; Bae, Jeomil; Shin, Tae-Hwan; Kang, Se Hun; Jeong, Moonkyoung; Han, Yunho; Park, Ji-Ho; et al, JOURNAL OF CONTROLLED RELEASE, v.216, pp.56 - 68, 2015-10

19
Immunoinformatics-Aided Analysis of RSV Fusion and Attachment Glycoproteins to Design a Potent Multi-Epitope Vaccine

Dar, Hamza Arshad; Almajhdi, Fahad Nasser; Aziz, Shahkaar; Waheed, Yasir, VACCINES, v.10, no.9, 2022-09

20
Importin-9 wraps around the H2A-H2B core to act as nuclear importer and histone chperone

Padavannil, Abhilash; Sarkar, Prithwijit; Kim, Seung Joong; Cagatay, Tolga; Jiou, Jenny; Brautigam, Chad A.; Tomchick, Diana R.; et al, ELIFE, v.8, pp.e43630, 2019-03

21
Insights into degradation mechanism of N-end rule substrates by p62/SQSTM1 autophagy adapter

Kwon, Do Hoon; Park, Ok Hyun; Kim, Leehyeon; Jung, Yang Ouk; Park, Yeonkyoung; Jeong, Hyeongseop; Hyun, Jaekyung; et al, NATURE COMMUNICATIONS, v.9, 2018-08

22
Interpolated Mechanics-Molecular Mechanics Study of Internal Rotation Dynamics of the Chromophore Unit in Blue Fluorescent Protein and Its Variants

Park, Jae Woo; Rhee, Young Min, JOURNAL OF PHYSICAL CHEMISTRY B, v.116, no.36, pp.11137 - 11147, 2012-09

23
Irisin Mediates Effects on Bone and Fat via alpha V Integrin Receptors

Kim, Hyeonwoo; Wrann, Christiane D.; Jedrychowski, Mark; Vidoni, Sara; Kitase, Yukiko; Nagano, Kenichi; Zhou, Chenhe; et al, CELL, v.175, no.7, pp.1756 - +, 2018-12

24
IRSp53 promotes postsynaptic density formation and actin filament bundling

Feng, Zhe; Lee, Suho; Jia, Bowen; Jian, Tao; Kim, Eunjoon; Zhang, Mingjie, JOURNAL OF CELL BIOLOGY, v.221, no.8, 2022-06

25
LAR-RPTP Clustering Is Modulated by Competitive Binding between Synaptic Adhesion Partners and Heparan Sulfate

Won, Seoung Youn; Kim, Cha Yeon; Kim, Doyoun; Ko, Jaewon; Um, Ji Won; Lee, Sung Bae; Buck, Matthias; et al, FRONTIERS IN MOLECULAR NEUROSCIENCE, v.10, pp.327, 2017-10

26
Lpg0393 of Legionella pneumophila Is a Guanine-Nucleotide Exchange Factor for Rab5, Rab21 and Rab22

Sohn, Young Sik; Shin, Ho-Chul; Park, Wei Sun; Ge, Jianning; Kim, Chan-Hee; Lee, Bok Luel; Heo, Won-Do; et al, PLOS ONE, v.10, no.3, 2015-03

27
Mechanisms of the Binding/Dissociation Acceleration of the Target-Guide Interaction by Thermus thermophilus Argonaute

Jung, Seung-Ryoung; Kim, Eun Ji; Shin, Soochul; Song, Ji-Joon; Hohng, Sungchul, BULLETIN OF THE KOREAN CHEMICAL SOCIETY, v.39, no.2, pp.167 - 173, 2018-02

28
Mechanisms of Transcriptional Pausing in Bacteria

Kang, Jin Young; Mishanina, Tatiana V.; Landick, Robert; Darst, Seth A., JOURNAL OF MOLECULAR BIOLOGY, v.431, no.20, pp.4007 - 4029, 2019-09

29
Molecular Architecture of the Major Membrane Ring Component of the Nuclear Pore Complex

Upla, Paula; Kim, Seung Joong; Sampathkumar, Parthasarathy; Dutta, Kaushik; Cahill, Sean M.; Chemmama, Ilan E.; Williams, Rosemary; et al, STRUCTURE, v.25, no.3, pp.434 - 445, 2017-03

30
Molecular Architecture of Yeast Chromatin Assembly Factor 1

Kim, Dae-Geun; Setiaputra, Dheva; Jung, Tae Yang; Chung, Jae Hee; Leitner, Alexander; Yoon, Jung Min; Aebersold, Ruedi; et al, SCIENTIFIC REPORTS, v.6, 2016-05

31
Molecular basis for the recognition of primary microRNAs by the Drosha-DGCR8 complex

Han, JJ; Lee, Y; Yeom, KH; Nam, JW; Heo, I; Rhee, JK; Sohn, SY; et al, CELL, v.125, no.5, pp.887 - 901, 2006-06

32
Multiple functions of pyruvate kinase M2 in various cell types

Lee, Yoon-Beom; Min, Jung K.; Kim, Jae-Gyu; Cap, Kim Cuong; Islam, Rokibul; Hossain, Abu J.; Dogsom, Oyungerel; et al, JOURNAL OF CELLULAR PHYSIOLOGY, v.237, no.1, pp.128 - 148, 2022-01

33
Native Mass Spectrometry-Based Screening for Optimal Sample Preparation in Single-Particle Cryo-EM

Olinare, Paul Dominic B.; Kang, Jin Young; Llwellyn, Eliza; Chiu, Courtney; Chen, James; Malone, Brandon; Saecker, Ruth M.; et al, STRUCTURE, v.29, no.2, pp.186 - 195, 2021-02

34
Neurotrophin-3 Regulates Synapse Development by Modulating TrkC-PTP sigma Synaptic Adhesion and Intracellular Signaling Pathways

Han, Kyung Ah; Woo, Doyeon; Kim, Seungjoon; Choii, Gayoung; Jeon, Sangmin; Won, Seoung Youn; Kim, Ho Min; et al, JOURNAL OF NEUROSCIENCE, v.36, no.17, pp.4816 - 4831, 2016-04

35
Nuclear Import Receptor Inhibits Phase Separation of FUS through Binding to Multiple Sites

Yoshizawa, Takuya; Ali, Rustam; Jiou, Jenny; Fung, Ho Yee Joyce; Burke, Kathleen A.; Kim, Seung Joong; Lin, Yuan; et al, CELL, v.173, no.3, pp.693 - 705, 2018-04

36
Nuclear Resonance Vibrational Spectroscopy Definition of O-2 Intermediates in an Extradiol Dioxygenase: Correlation to Crystallography and Reactivity

Sutherlin, Kyle D.; Wasada-Tsutsui, Yuko; Mbughuni, Michael M.; Rogers, Melanie S.; Park, Kiyoung; Liu, Lei V.; Kwak, Yeonju; et al, JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, v.140, no.48, pp.16495 - 16513, 2018-12

37
Optogenetic tools for microbial synthetic biology

Chia, Natalie; Lee, Sang Yup; Tong, Yaojun, BIOTECHNOLOGY ADVANCES, v.59, 2022-10

38
Pancreatic adenocarcinoma upregulated factor promotes metastasis by regulating TLR/CXCR4 activation

Park, HD; Lee, Y; Oh, YK; Jung, JG; Park, YW; Myung, K; Kim, KH; et al, ONCOGENE, v.30, no.2, pp.201 - 211, 2011-01

39
Presynaptic PTP sigma regulates postsynaptic NMDA receptor function through direct adhesion-independent mechanisms

Kim, Kyungdeok; Shin, Wangyong; Kang, Muwon; Lee, Suho; Kim, Doyoun; Kang, Ryeonghwa; Jung, Yewon; et al, ELIFE, v.9, 2020-03

40
Purified Argonaute2 and an siRNA form recombinant human RISC

Rivas, Fabiola V.; Tolia, Niraj H.; Song, Ji-Joon; Aragon, Juan P.; Liu, Jidong; Hannon, Gregory J.; Joshua-Tor, Leemor, NATURE STRUCTURAL & MOLECULAR BIOLOGY, v.12, no.4, pp.340 - 349, 2005-04

41
Recognition of Lipopeptide Patterns by Toll-like Receptor 2-Toll-like Receptor 6 Heterodimer

Kang, Jin-Young; Nan, Xuehua; Jin, Mi-Sun; Youn, Suk-Jun; Ryu, Young-Hee; Mah, Shin-Jee; Han, Seung-Hyun; et al, IMMUNITY, v.31, no.6, pp.873 - 881, 2009-12

42
Recognition of lipopolysaccharide pattern by TLR4 complexes

Park, Beom Seok; Lee, Jie-Oh, EXPERIMENTAL AND MOLECULAR MEDICINE, v.45, no.12, pp.1 - 8, 2013-12

43
Reconfiguration of the proteasome during chaperone-mediated assembly

Park, Soyeon; Li, Xueming; Kim, Ho Min; Singh, Chingakham Ranjit; Tian, Geng; Hoyt, Martin A.; Lovell, Scott; et al, NATURE, v.497, no.7450, pp.512 - 516, 2013-05

44
RNA activation-independent DNA targeting of the Type III CRISPR-Cas system by a Csm complex

Park, Kwang-Hyun; An, Yan; Jung, Tae Yang; Baek, In-Young; Noh, Haemin; Ahn, Woo-Chan; Hebert, Hans; et al, EMBO REPORTS, v.18, no.5, pp.826 - 840, 2017-05

45
RNA Polymerase Accommodates a Pause RNA Hairpin by Global Conformational Rearrangements that Prolong Pausing

Kang, Jin Young; Mishanina, Tatiana V.; Bellecourt, Michael J.; Mooney, Rachel Anne; Darst, Seth A.; Landick, Robert, MOLECULAR CELL, v.69, no.5, pp.802 - 815, 2018-03

46
Sensing of microbial molecular patterns by Toll-like receptors

Song, Dong-Hyun; Lee, Jie-Oh, IMMUNOLOGICAL REVIEWS, v.250, pp.216 - 229, 2012-11

47
SUMOylation of pontin chromatin-remodeling complex reveals a signal integration code in prostate cancer cells

Kim, Jung Hwa; Lee, Ji Min; Nam, Hye Jin; Choi, Hee June; Yang, Jung Woo; Lee, Jason S.; Kim, Mi Hyang; et al, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, v.104, no.52, pp.20793 - 20798, 2007-12

48
Super-resolution imaging of fluorescently labeled, endogenous RNA Polymerase II in living cells with CRISPR/Cas9-mediated gene editing

Cho, Won-Ki; Jayanth, Namrata; Mullen, Susan; Tan, Tzer Han; Jung, Yoon J.; Cisse, Ibrahim I., SCIENTIFIC REPORTS, v.6, 2016-10

49
Synapse formation regulated by protein tyrosine phosphatase receptor T through interaction with cell adhesion molecules and Fyn

Lim, So-Hee; Kwon, Seok-Kyu; Lee, Myung Kyu; Moon, Jeonghee; Jeong, Dae Gwin; Park, Eunha; Kim, Seung Jun; et al, EMBO JOURNAL, v.28, no.22, pp.3564 - 3578, 2009-11

50
The big picture of chromatin biology by cryo-EM

Jang, Seongmin; Song, Ji-Joon, CURRENT OPINION IN STRUCTURAL BIOLOGY, v.58, pp.76 - 87, 2019-10

51
The Histone Modification Domain of Paf1 Complex Subunit Rtf1 Directly Stimulates H2B Ubiquitylation through an Interaction with Rad6

Van Oss, S. Branden; Shirra, Margaret K.; Bataille, Alain R.; Wier, Adam D.; Yen, Kuangyu; Vinayachandran, Vinesh; Byeon, In-Ja L.; et al, MOLECULAR CELL, v.64, no.4, pp.815 - 825, 2016-11

52
Transient Protein-Protein Interaction of the SH3-Peptide Complex via Closely Located Multiple Binding Sites

Hahn, Seung Soo; Kim, Dongsup, PLOS ONE, v.7, no.3, 2012-03

53
Translocating RNA polymerase generates R-loops at DNA double-strand breaks without any additional factors

Lim, Gunhyoung; Hwang, Seungha; Yu, Kilwon; Kang, Jin Young; Kang, Changwon; Hohng, Sungchul, NUCLEIC ACIDS RESEARCH, v.51, no.18, pp.9838 - 9848, 2023-08

54
UPF1 promotes rapid degradation of m(6)A-containing RNAs

Boo, Sung Ho; Ha, Hongseok; Lee, Yujin; Shin, Min-Kyung; Lee, Sena; Kim, Yoon Ki, CELL REPORTS, v.39, no.8, 2022-05

55
UPFront and center in RNA decay: UPF1 in nonsense-mediated mRNA decay and beyond

Kim, Yoon Ki; Maquat, Lynne E., RNA, v.25, no.4, pp.407 - 422, 2019-04

56
VipD of Legionella pneumophila Targets Activated Rab5 and Rab22 to Interfere with Endosomal Trafficking in Macrophages

Ku, Bonsu; Lee, Kwang-Hoon; Park, Wei Sun; Yang, Chul-Su; Ge, Jianning; Lee, Seong-Gyu; Cha, Sun-Shin; et al, PLOS PATHOGENS, v.8, no.12, pp.01 - 13, 2012-12

57
WDR5 Interacts with Mixed Lineage Leukemia (MLL) Protein via the Histone H3-binding Pocket

Song, Ji-Joon; Kingston, Robert E., JOURNAL OF BIOLOGICAL CHEMISTRY, v.283, no.50, pp.35258 - 35264, 2008-12

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