Browse "RIMS Journal Papers" by Subject DATABASE

Showing results 1 to 18 of 18

1
A fully automatic evolutionary classification of protein folds: Dali domain dictionary version 3.

dietmann s; park jong; notredame c; heger a; lappe m; holm l., NUCLEIC ACIDS RESEARCH, v.29, no.1, pp.55 - 57, 2001-01

2
Advancements in High-Throughput Screening and Machine Learning Design for 2D Ferromagnetism: A Comprehensive Review

Xin, Chao; Song, Bingqian; Jin, Guangyong; Song, Yongli; Pan, Feng, ADVANCED THEORY AND SIMULATIONS, v.6, no.12, 2023-12

3
Architecture of basic building blocks in protein and domain structural interaction networks

Moon, HS; Bhak, J; Lee, Kwang-Hyung; Lee, Doheon, BIOINFORMATICS, v.21, pp.1479 - 1486, 2005-04

4
Comparative interactomics analysis of protein family interaction networks using PSIMAP (protein structural interactome map)

Park D.; Lee S.; Bolser D.; Schroeder M.; Lappe M.; Oh D.; Bhak J., BIOINFORMATICS, v.21, no.15, pp.3234 - 3240, 2005

5
EnsemPro: An ensemble approach to predicting transcription start sites in human genomic DNA sequences

Won H.-H.; Kim M.-J.; Kim S.; Kim J.-W., GENOMICS, v.91, no.3, pp.259 - 266, 2008

6
Estimating the significance of sequence order in protein secondary structure prediction.

jong park; sabine dietmann; andreas heger; liisa holm, BIOINFORMATICS, v.16, no.11, pp.978 - 987, 2000

7
Functional annotation and analysis of Korean patented biological sequences using bioinformatics

Lee B.W.; Kim T.H.; Kim S.K.; Kim S.S.; Ryu G.C.; Bhak J., MOLECULES AND CELLS, v.21, no.2, pp.269 - 275, 2006

8
Intermediate sequences increase the detection of homology between sequences

Park, Jong H.; Teichmann, Sarah A.; Hubbard, Tim; Chothia, Cyrus, JOURNAL OF MOLECULAR BIOLOGY, v.273, no.1, pp.349 - 354, 1997-10

9
Machine learning-based atom contribution method for the prediction of surface charge density profiles and solvent design

Liu, Qilei; Zhang, Lei; Tang, Kun; Liu, Linlin; Du, Jian; Meng, Qingwei; Gani, Rafiqul, AICHE JOURNAL, v.67, no.2, pp.e17110, 2021-02

10
Mapping protein family interactions: intramolecular and intermolecular protein family interaction repertoires in the PDB and yeast.

park j; lappe m; teichmann sa., JOURNAL OF MOLECULAR BIOLOGY, v.307, no.3, pp.929 - 938, 2001-03

11
Optimization of queries with user-defined predicates

Chaudhuri, S; Shim, Kyuseok, ACM TRANSACTIONS ON DATABASE SYSTEMS, v.24, no.2, pp.177 - 228, 1999-06

12
PartsList: a web-based system for dynamically ranking protein folds based on disparate attributes, including whole-genome expression and interaction information.

Qian J; Stenger B; Wilson CA; Lin J; Jansen R; Teichmann SA; Park J; et al, NUCLEIC ACIDS RESEARCH, v.29, no.8, pp.1750 - 1764, 2001

13
Predicting protein interactions in human by homologous interactions in yeast

Kim, H; Park, J; Han, K, ADVANCES IN KNOWLEDGE DISCOVERY AND DATA MINING BOOK SERIES: LECTURE NOTES IN ARTIFICIAL INTELLIGENCE, v.2637, pp.159 - 165, 2003

14
Protein networks markedly improve prediction of subcellular localization in multiple eukaryotic species

Lee K.; Chuang H.-Y.; Beyer A.; Sung M.-K.; Huh W.-K.; Lee B.; Ideker T., NUCLEIC ACIDS RESEARCH, v.36, no.20, 2008

15
Protein structure prediction: Playing the fold.

hubbard t; jong park; lahm a; leplae r.; tramontano a., TRENDS IN BIOCHEMICAL SCIENCES, v.21, no.8, pp.279 - 281, 1996-08

16
Sequence Comparisons Using Multiple Sequences Detect Three Times as Many Remote Homologues as Pairwise Methods.

Jong Park; Karplus; K.; Barrett; C.; Hughey; R.; et al, JOURNAL OF MOLECULAR BIOLOGY, v.284, no.4, pp.1201 - 1210, 1998-11

17
Structural assignments to the proteins of Mycoplasma genitalium show that they have been formed by extensive gene duplications and domain rearrangements.

Sarah Teichmann; Jong Park; Cyrus Chothia, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, v.95, no.25, pp.14658 - 14663, 1998-12

18
Visualisation and graph-theoretic analysis of a large-scale protein structural interactome

Bolser, D; Dafas, P; Harrington, R; Park, Jong H.; Schroeder, M, BMC BIOINFORMATICS, v.4, pp.138 - 143, 2003-10

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