Recent advances in objective-based uncertainty-quantification (objective-UQ) have shown that such a goal-driven approach for quantifying model uncertainty is extremely usefulin real-world problems that aim at achieving specific objectives based on complex uncertain systems. Central to this objective-UQ is the concept of mean objective cost of uncertainty (MOCU), which provides effective means of quantifying the impact of uncertainty on the operational goals at hand. MOCU is especially useful for optimal experimental design (OED) as the potential efficacy of an experimental (or data acquisition) campaign can be quantified by estimating the MOCU that is expected to remain after the campaign. However, MOCU-based OED tends to be computationally expensive, which limits its practical applicability. In this paper, we propose a novel machine learning (ML) scheme that can significantly accelerate MOCU computation and expedite MOCU-based experimental design. The main idea is to use an ML model to efficiently search for the optimal robust operator under model uncertainty, a necessary step for computing MOCU. We apply the proposed ML-based OED acceleration scheme to design experiments aimed at optimally enhancing the control performance of uncertain Kuramoto oscillator models. Our results show that the proposed scheme results in up to 154-fold speed improvement without any degradation of the OED performance.