An improved algorithm for analytical gradient evaluation in resolution-of-the-identity second-order Moller-Plesset perturbation theory: Application to alanine tetrapeptide conformational analysis

Cited 133 time in webofscience Cited 0 time in scopus
  • Hit : 143
  • Download : 0
We present a new algorithm for analytical gradient evaluation in resolution-of-the-identity second-order Moller-Plesset perturbation theory (RI-MP2) and thoroughly assess its computational performance and chemical accuracy. This algorithm addresses the potential I/O bottlenecks associated with disk-based storage and access of the RI-MP2 t-amplitudes by utilizing a semi-direct hatching approach and yields computational speed-ups of approximately 2-3 over the best conventional MP2 analytical gradient algorithms. In addition, we attempt to provide a straightforward guide to performing reliable and cost-efficient geometry optimizations at the RI-MP2 level of theory. By computing relative atomization energies for the G3/99 set and optimizing a test set of 136 equilibrium molecular structures, we demonstrate that satisfactory relative accuracy and significant computational savings can be obtained using Pople-style atomic orbital basis sets with the existing auxiliary basis expansions for RI-MP2 computations. We also show that RI-MP2 geometry optimizations reproduce molecular equilibrium structures with no significant deviations (>0.1 pm) from the predictions of conventional MP2 theory. As a chemical application, we computed the extended-globular conformational energy gap in alanine tetrapeptide at the extrapolated RI-MP2/cc-pV(TQ)Z level as 2.884, 4.414, and 4.994 kcal/mol for structures optimized using the HF, DFT (B3LYP), and RI-MP2 methodologies and the cc-pVTZ basis set, respectively. These marked energetic discrepancies originate from differential intramolecular hydrogen bonding present in the globular conformation optimized at these levels of theory and clearly demonstrate the importance of long-range correlation effects in polypeptide conformational analysis. (C) 2007 Wiley Periodicals, Inc.
Publisher
WILEY-BLACKWELL
Issue Date
2007-04
Language
English
Article Type
Article
Keywords

DENSITY-FUNCTIONAL THEORY; POTENTIAL-ENERGY SURFACE; GAUSSIAN-BASIS SETS; SELF-INTERACTION CORRECTION; LINEAR SCALING COMPUTATION; CORRELATED WAVE-FUNCTIONS; MOLECULAR-ORBITAL METHODS; MANY-ELECTRON SYSTEMS; AB-INITIO; FITTING APPROXIMATIONS

Citation

JOURNAL OF COMPUTATIONAL CHEMISTRY, v.28, no.5, pp.839 - 856

ISSN
0192-8651
DOI
10.1002/jcc.20604
URI
http://hdl.handle.net/10203/225410
Appears in Collection
CH-Journal Papers(저널논문)
Files in This Item
There are no files associated with this item.
This item is cited by other documents in WoS
⊙ Detail Information in WoSⓡ Click to see webofscience_button
⊙ Cited 133 items in WoS Click to see citing articles in records_button

qr_code

  • mendeley

    citeulike


rss_1.0 rss_2.0 atom_1.0