Effect of Chromophore Potential Model on the Description of Exciton-Phonon Interactions

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dc.contributor.authorKim, Chang Wooko
dc.contributor.authorPark, Jae Wooko
dc.contributor.authorRhee, Young Minko
dc.date.accessioned2017-08-16T08:54:15Z-
dc.date.available2017-08-16T08:54:15Z-
dc.date.created2017-08-07-
dc.date.created2017-08-07-
dc.date.issued2015-08-
dc.identifier.citationJOURNAL OF PHYSICAL CHEMISTRY LETTERS, v.6, no.15, pp.2875 - 2880-
dc.identifier.issn1948-7185-
dc.identifier.urihttp://hdl.handle.net/10203/225360-
dc.description.abstractSystem-bath interactions in nonadiabatic simulations are often depicted by first performing molecular dynamics calculations and then by evaluating excitation energies at the trajectory snapshots. Usually, molecular mechanics models and quantum chemical calculations are used in a mixed manner toward a trade-off between efficiency and accuracy. Here we investigate how this mixing scheme affects that depiction by using various potential energy surfaces (PESs) of coumarin-153 chromophore, with the help of interpolated PESs that can closely match the accuracies of quantum chemical calculations. We find that although spectral densities are computed only with second stage data the PES characteristics during the first sampling stage can still prevail in the densities, with limited influences on related reorganization energies. Our results suggest that using the mixed scheme can be acceptable when dynamics is mainly governed by the integrated effect of all phonon modes, but care must be taken for understanding detailed effects from individual modes.-
dc.languageEnglish-
dc.publisherAMER CHEMICAL SOC-
dc.subjectEXCITATION-ENERGY TRANSFER-
dc.subjectMATTHEWS-OLSON COMPLEX-
dc.subjectMOLECULAR-MECHANICS-
dc.subjectPURPLE BACTERIA-
dc.subjectFORCE-FIELD-
dc.subjectDYNAMICS-
dc.subjectPROTEINS-
dc.titleEffect of Chromophore Potential Model on the Description of Exciton-Phonon Interactions-
dc.typeArticle-
dc.identifier.wosid000359333100005-
dc.identifier.scopusid2-s2.0-84938685090-
dc.type.rimsART-
dc.citation.volume6-
dc.citation.issue15-
dc.citation.beginningpage2875-
dc.citation.endingpage2880-
dc.citation.publicationnameJOURNAL OF PHYSICAL CHEMISTRY LETTERS-
dc.identifier.doi10.1021/acs.jpclett.5b01141-
dc.contributor.localauthorRhee, Young Min-
dc.contributor.nonIdAuthorKim, Chang Woo-
dc.contributor.nonIdAuthorPark, Jae Woo-
dc.description.isOpenAccessN-
dc.type.journalArticleArticle-
dc.subject.keywordPlusEXCITATION-ENERGY TRANSFER-
dc.subject.keywordPlusMATTHEWS-OLSON COMPLEX-
dc.subject.keywordPlusMOLECULAR-MECHANICS-
dc.subject.keywordPlusPURPLE BACTERIA-
dc.subject.keywordPlusFORCE-FIELD-
dc.subject.keywordPlusDYNAMICS-
dc.subject.keywordPlusPROTEINS-
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